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Heraklion International Airport to Santorini Airport flight

Search for flights from Heraklion to Santorini and check out affordable one-way and round-trip options.

      • Cheapest nonstop
        HER 16:30
        40m
        Direct
        JTR 17:10
        Heraklion - Santorini | Tue, May 26 | AEGEAN
        JTR 17:35
        40m
        Direct
        HER 18:15
        Santorini - Heraklion | Sat, May 30 | AEGEAN
        €115 €180
        36% off
        36% off
        €180 €115
      • HER 18:55
        4h
        1 stop
        JTR 22:55
        Heraklion - Santorini | Tue, May 26 | SKY express
        JTR 17:45
        40m
        Direct
        HER 18:25
        Santorini - Heraklion | Tue, Jun 2 | AEGEAN
        €143 €180
        21% off
        21% off
        €180 €143
      • HER 08:40
        6h 15m
        1 stop
        JTR 14:55
        Heraklion - Santorini | Wed, Apr 1 | SKY express
        JTR 11:55
        7h 55m
        1 stop
        HER 19:50
        Santorini - Heraklion | Sun, Apr 5 | SKY express
        €149 €180
        17% off
        17% off
        €180 €149
      • HER 08:10
        16h 5m
        1 stop
        JTR 00:15
        Heraklion - Santorini | Thu, Apr 2 | AEGEAN
        JTR 08:25
        16h
        1 stop
        HER 00:25
        Santorini - Heraklion | Sun, Apr 5 | AEGEAN
        €150
        17% off
        €180 €150
      • HER 06:00
        17h 25m
        1 stop
        JTR 23:25
        Heraklion - Santorini | Mon, Apr 27 | AEGEAN
        JTR 08:25
        5h 55m
        1 stop
        HER 14:20
        Santorini - Heraklion | Tue, Apr 28 | AEGEAN
        €151
        16% off
        €180 €151
      • HER 16:00
        8h 15m
        1 stop
        JTR 00:15
        Heraklion - Santorini | Mon, May 25 | SKY express
        JTR 17:35
        40m
        Direct
        HER 18:15
        Santorini - Heraklion | Sat, May 30 | AEGEAN
        €151
        16% off
        €180 €151
      • HER 08:10
        14h 35m
        1 stop
        JTR 22:45
        Heraklion - Santorini | Tue, Apr 21 | AEGEAN
        JTR 16:35
        14h 55m
        1 stop
        HER 07:30
        Santorini - Heraklion | Thu, Apr 23 | AEGEAN
        €155
        14% off
        €180 €155
      • HER 23:20
        24h 55m
        1 stop
        JTR 00:15
        Heraklion - Santorini | Mon, May 25 | AEGEAN
        JTR 17:35
        40m
        Direct
        HER 18:15
        Santorini - Heraklion | Sat, May 30 | AEGEAN
        €156
        13% off
        €180 €156
      • HER 22:25
        16h 30m
        1 stop
        JTR 14:55
        Heraklion - Santorini | Tue, Apr 21 | SKY express
        JTR 11:25
        10h 20m
        1 stop
        HER 21:45
        Santorini - Heraklion | Thu, Apr 23 | SKY express
        €160
        11% off
        €180 €160
      • HER 06:00
        16h 45m
        1 stop
        JTR 22:45
        Heraklion - Santorini | Tue, Apr 28 | AEGEAN
        JTR 08:25
        4h 45m
        1 stop
        HER 13:10
        Santorini - Heraklion | Thu, Apr 30 | AEGEAN
        €162
        10% off
        €180 €162
      • HER 13:00
        17h 25m
        1 stop
        JTR Invalid Date
        Heraklion - Santorini | Mon, Mar 30 | Normal Airline
        JTR 15:00
        6h
        Direct
        HER 16:00
        Santorini - Heraklion | Wed, Apr 1 | Normal Airline
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      • HER 14:55
        8h
        1 stop
        JTR 22:55
        Heraklion - Santorini | Thu, Apr 23 | SKY express
        €49 €73
        33% off
        33% off
        €73 €49
      • HER 06:00
        17h 25m
        1 stop
        JTR 23:25
        Heraklion - Santorini | Mon, Apr 27 | AEGEAN
        €49 €73
        33% off
        33% off
        €73 €49
      • HER 06:00
        17h 25m
        1 stop
        JTR 23:25
        Heraklion - Santorini | Mon, Apr 20 | AEGEAN
        €57 €73
        22% off
        22% off
        €73 €57
      • HER 22:25
        24h 20m
        1 stop
        JTR 22:45
        Heraklion - Santorini | Mon, Apr 27 | SKY express
        €58
        21% off
        €73 €58
      • HER 06:00
        16h 55m
        1 stop
        JTR 22:55
        Heraklion - Santorini | Thu, Apr 23 | AEGEAN
        €58
        21% off
        €73 €58
      • HER 22:25
        24h 20m
        1 stop
        JTR 22:45
        Heraklion - Santorini | Mon, Apr 20 | SKY express
        €58
        21% off
        €73 €58
      • HER 22:25
        16h 30m
        1 stop
        JTR 14:55
        Heraklion - Santorini | Wed, Apr 1 | SKY express
        €60
        18% off
        €73 €60
      • HER 22:25
        9h 30m
        1 stop
        JTR 07:55
        Heraklion - Santorini | Sat, Apr 11 | SKY express
        €62
        15% off
        €73 €62
      • HER 22:25
        25h 25m
        1 stop
        JTR 23:50
        Heraklion - Santorini | Sun, Apr 12 | SKY express
        €63
        14% off
        €73 €63
      • HER 23:20
        8h 35m
        1 stop
        JTR 07:55
        Heraklion - Santorini | Wed, Apr 22 | AEGEAN
        €65
        11% off
        €73 €65
      • HER 13:00
        17h 25m
        1 stop
        JTR Invalid Date
        Heraklion - Santorini | Mon, Mar 30 | Normal Airline
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Displayed flight fares from Heraklion to Santorini are based on average prices across airlines for the next 3 months, according to the latest Trip.com database.

Selected Airlines from Heraklion International Airport to Santorini Airport

See which airlines fly from Heraklion to Santorini. Find the airline that best meets your travel needs by comparing prices and treat yourself to an enjoyable journey.

SKY express
From €49
AEGEAN
From €49

Find more flights and airlines

Flight Schedule from Heraklion International Airport to Santorini Airport

Check the schedule for flights from Heraklion to Santorini and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. GQ213

    Heraklion International Airport

    10:15

    HER

    1h 5m

    Direct

    11:20

    ATH

    S M T W T F S
    Search

  2. FR1236

    Athens International Airport "Eleftherios Venizelos"

    22:35

    ATH

    50m

    Direct

    23:25

    JTR

    S - T W T - S

  3. GQ217

    Heraklion International Airport

    21:45

    HER

    50m

    Direct

    22:35

    ATH

    S M T W T F S
    Search

  4. FR1232

    Athens International Airport "Eleftherios Venizelos"

    07:05

    ATH

    50m

    Direct

    07:55

    JTR

    S M T W T F S

  5. GQ217

    Heraklion International Airport

    21:45

    HER

    50m

    Direct

    22:35

    ATH

    S M T W T F S
    Search

  6. GQ340

    Athens International Airport "Eleftherios Venizelos"

    07:10

    ATH

    45m

    Direct

    07:55

    JTR

    S M T W T F S

  7. A3321

    Heraklion International Airport

    21:50

    HER

    50m

    Direct

    22:40

    ATH

    S M T W T F S
    Search

  8. A3352

    Athens International Airport "Eleftherios Venizelos"

    06:50

    ATH

    55m

    Direct

    07:45

    JTR

    S M T W T F -

  9. A3303

    Heraklion International Airport

    08:10

    HER

    50m

    Direct

    09:00

    ATH

    S M T W T F S
    Search

  10. FR1236

    Athens International Airport "Eleftherios Venizelos"

    22:35

    ATH

    50m

    Direct

    23:25

    JTR

    S - T W T - S

  11. GQ217

    Heraklion International Airport

    21:45

    HER

    50m

    Direct

    22:35

    ATH

    S M T W T F S
    Search

  12. GQ350

    Athens International Airport "Eleftherios Venizelos"

    14:30

    ATH

    55m

    Direct

    15:25

    JTR

    S M T W T F S

  13. A3301

    Heraklion International Airport

    06:00

    HER

    50m

    Direct

    06:50

    ATH

    S M T W T F S
    Search

  14. FR1236

    Athens International Airport "Eleftherios Venizelos"

    22:35

    ATH

    50m

    Direct

    23:25

    JTR

    S - T W T - S

  15. GQ211

    Heraklion International Airport

    08:40

    HER

    50m

    Direct

    09:30

    ATH

    S M T W T F S
    Search

  16. FR1232

    Athens International Airport "Eleftherios Venizelos"

    07:05

    ATH

    50m

    Direct

    07:55

    JTR

    S M T W T F S

  17. GQ217

    Heraklion International Airport

    21:45

    HER

    50m

    Direct

    22:35

    ATH

    S M T W T F S
    Search

  18. FR4171

    Athens International Airport "Eleftherios Venizelos"

    21:55

    ATH

    50m

    Direct

    22:45

    JTR

    - M - - - F -

  19. A3319

    Heraklion International Airport

    18:25

    HER

    50m

    Direct

    19:15

    ATH

    S M T W T F S
    Search

  20. FR6922

    Athens International Airport "Eleftherios Venizelos"

    17:35

    ATH

    50m

    Direct

    18:25

    JTR

    S - - W - - -
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Heraklion International Airport to Santorini Airport Flights Info

Flight distance121.93km
Cheapest one-way ticket price€49
Cheapest return ticket price€115

FAQs for Heraklion International Airport to Santorini Airport Flights

  • How long does it take to fly from Heraklion International Airport (HER) to Santorini Airport (JTR)?

    It takes around 40 minutes to fly from Heraklion International Airport (her) to Santorini Airport(jtr).
  • There are around 1 daily flights from Heraklion International Airport (HER) to Santorini Airport (JTR).
  • Tickets cost around €79 in June, making it the cheapest month to book. Heraklion International Airport (HER) to Santorini Airport (JTR) is a popular route, so don't forget to book your tickets in advance.
  • The route from Heraklion International Airport (HER) to Santorini Airport (JTR) is quite popular. Without considering departure times or holidays, tickets cost around €79 in June, the most expensive month to book this route.

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