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Flights from Manila to El Nido

Explore the cheapest one-way and round-trip flights from Manila to El Nido over the next 90 days, with one-way fares from CAD 167 and round-trip from CAD 317. Based on Trip.com's latest 7-day flight data.

      • MNL 23:25
        6h 35m
        1 stop
        ENI 06:00
        Manila - El Nido | Fri, Nov 6 | Cebu Pacific
        ENI 16:40
        5h 40m
        1 stop
        MNL 22:20
        El Nido - Manila | Wed, Nov 11 | Cebgo
        CAD 317 CAD 435
        27% off
        27% off
        CAD 435 CAD 317
      • MNL 21:55
        8h 5m
        1 stop
        ENI 06:00
        Manila - El Nido | Sat, Oct 31 | Cebu Pacific
        ENI 05:50
        8h 25m
        1 stop
        MNL 14:15
        El Nido - Manila | Sat, Nov 7 | Cebgo
        CAD 324 CAD 435
        26% off
        26% off
        CAD 435 CAD 324
      • MNL 23:15
        6h 45m
        1 stop
        ENI 06:00
        Manila - El Nido | Sun, Nov 1 | Cebu Pacific
        ENI 05:50
        10h 15m
        1 stop
        MNL 16:05
        El Nido - Manila | Thu, Nov 5 | Cebgo
        CAD 326 CAD 435
        25% off
        25% off
        CAD 435 CAD 326
      • MNL 21:55
        8h 5m
        1 stop
        ENI 06:00
        Manila - El Nido | Tue, Oct 27 | Cebu Pacific
        ENI 05:50
        10h 15m
        1 stop
        MNL 16:05
        El Nido - Manila | Thu, Oct 29 | Cebgo
        CAD 334
        23% off
        CAD 435 CAD 334
      • MNL 22:45
        7h 15m
        1 stop
        ENI 06:00
        Manila - El Nido | Mon, Oct 26 | Cebu Pacific
        ENI 16:40
        10h 30m
        1 stop
        MNL 03:10
        El Nido - Manila | Wed, Oct 28 | Cebgo
        CAD 335
        23% off
        CAD 435 CAD 335
      • MNL 06:05
        5h 5m
        1 stop
        ENI 11:10
        Manila - El Nido | Sat, Oct 3 | Cebu Pacific
        ENI 06:50
        10h 55m
        1 stop
        MNL 17:45
        El Nido - Manila | Sat, Oct 10 | Cebgo
        CAD 338
        22% off
        CAD 435 CAD 338
      • MNL 22:40
        7h 20m
        1 stop
        ENI 06:00
        Manila - El Nido | Wed, Oct 28 | Cebu Pacific
        ENI 16:40
        7h 55m
        1 stop
        MNL 00:35
        El Nido - Manila | Fri, Oct 30 | Cebgo
        CAD 340
        22% off
        CAD 435 CAD 340
      • MNL 11:30
        5h 30m
        1 stop
        ENI 17:00
        Manila - El Nido | Mon, Oct 5 | Cebu Pacific
        ENI 13:25
        8h 40m
        1 stop
        MNL 22:05
        El Nido - Manila | Mon, Oct 12 | Cebgo
        CAD 349
        20% off
        CAD 435 CAD 349
      • MNL 23:25
        6h 35m
        1 stop
        ENI 06:00
        Manila - El Nido | Fri, Oct 30 | Cebu Pacific
        ENI 10:45
        9h 50m
        1 stop
        MNL 20:35
        El Nido - Manila | Sun, Nov 1 | Cebgo
        CAD 349
        20% off
        CAD 435 CAD 349
      • MNL 21:40
        8h 20m
        1 stop
        ENI 06:00
        Manila - El Nido | Sat, Oct 24 | Cebu Pacific
        ENI 05:50
        10h 15m
        1 stop
        MNL 16:05
        El Nido - Manila | Thu, Oct 29 | Cebgo
        CAD 356
        18% off
        CAD 435 CAD 356
      • MNL 13:00
        17h 25m
        1 stop
        ENI 14:00
        Manila - El Nido | Fri, Sep 18 | Normal Airline
        ENI 15:00
        6h
        Direct
        MNL 16:00
        El Nido - Manila | Sun, Sep 20 | Normal Airline
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      • MNL 16:15
        4h 35m
        1 stop
        ENI 20:50
        Manila - El Nido | Mon, Oct 5 | Cebu Pacific
        CAD 167 CAD 224
        25% off
        25% off
        CAD 224 CAD 167
      • MNL 03:50
        7h 20m
        1 stop
        ENI 11:10
        Manila - El Nido | Tue, Oct 6 | Cebu Pacific
        CAD 167 CAD 224
        25% off
        25% off
        CAD 224 CAD 167
      • MNL 22:45
        7h 15m
        1 stop
        ENI 06:00
        Manila - El Nido | Mon, Oct 26 | Cebu Pacific
        CAD 170 CAD 224
        24% off
        24% off
        CAD 224 CAD 170
      • MNL 05:55
        5h 15m
        1 stop
        ENI 11:10
        Manila - El Nido | Tue, Oct 6 | Philippines AirAsia
        CAD 171
        24% off
        CAD 224 CAD 171
      • MNL 05:55
        14h 55m
        1 stop
        ENI 20:50
        Manila - El Nido | Mon, Oct 5 | Philippines AirAsia
        CAD 172
        23% off
        CAD 224 CAD 172
      • MNL 09:35
        7h 55m
        1 stop
        ENI 17:30
        Manila - El Nido | Mon, Sep 21 | Cebu Pacific
        CAD 173
        23% off
        CAD 224 CAD 173
      • MNL 22:20
        7h 40m
        1 stop
        ENI 06:00
        Manila - El Nido | Tue, Oct 27 | Cebu Pacific
        CAD 181
        19% off
        CAD 224 CAD 181
      • MNL 18:10
        11h 50m
        1 stop
        ENI 06:00
        Manila - El Nido | Mon, Oct 26 | Philippines AirAsia
        CAD 181
        19% off
        CAD 224 CAD 181
      • MNL 12:20
        17h 40m
        1 stop
        ENI 06:00
        Manila - El Nido | Tue, Oct 27 | Philippines AirAsia
        CAD 182
        19% off
        CAD 224 CAD 182
      • MNL 06:45
        10h 15m
        1 stop
        ENI 17:00
        Manila - El Nido | Sat, Oct 10 | Philippines AirAsia
        CAD 183
        18% off
        CAD 224 CAD 183
      • MNL 13:00
        17h 25m
        1 stop
        ENI 14:00
        Manila - El Nido | Fri, Sep 18 | Normal Airline
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Which airlines are the most popular for Manila to El Nido flights?

Choose from 1 airlines flying from Manila to El Nido, including Cebu Pacific, and . Cebu Pacific currently offers the cheapest ticket on this route.
Cebu Pacific logo Cebu Pacific
Airlines are determined based on actual purchased flight tickets from Manila to El Nido according to previous 12 months data from Trip.com.

Trip.com Price Insights on Manila to El Nido Flights

What is the cheapest month to book a one-way flight from Manila to El Nido?

Average price of one-way tickets from Manila to El Nido booked on Trip.com over the past 12 months.

For a one-way flight from Manila to El Nido, fares are lowest in October (CAD 172) and highest in August (CAD 296).

CAD 296
CAD 234
CAD 172
CAD 110
    Cheapest
  • CAD 195
    Sep
  • CAD 172
    Oct
  • CAD 227
    Nov
  • CAD 239
    Dec
  • CAD 199
    Jan
  • CAD 231
    Feb
  • CAD 218
    Mar
  • CAD 241
    Apr
  • CAD 275
    May
  • CAD 294
    Jun
  • CAD 277
    Jul
  • CAD 296
    Aug

What is the cheapest month to book a return flight from Manila to El Nido?

Average price of return tickets from Manila to El Nido booked on Trip.com over the past 12 months.

For a return flight from Manila to El Nido, fares are lowest in April (CAD 319) and highest in July (CAD 698).

CAD 698
CAD 509
CAD 319
CAD 130
    Cheapest
  • CAD 378
    Sep
  • CAD 397
    Oct
  • CAD 455
    Nov
  • CAD 487
    Dec
  • CAD 404
    Jan
  • CAD 465
    Feb
  • CAD 477
    Mar
  • CAD 319
    Apr
  • CAD 382
    May
  • CAD 552
    Jun
  • CAD 698
    Jul
  • CAD 579
    Aug

Which day of the week is cheapest to fly from Manila to El Nido?

Data is based on the past 12 months and shows the average weekly airfare from Manila to El Nido on different days of the week according to Trip.com.

Based on Trip.com data from the past 12 months, the cheapest day to fly from Manila to El Nido is Thursday. The average fare on this day is usually lower than on other days. Try to avoid flying on Monday as fares are usually the highest.

CAD 249
CAD 239
CAD 229
CAD 219
    Cheapest
  • CAD 249
    Mon
  • CAD 240
    Tue
  • CAD 242
    Wed
  • CAD 229
    Thu
  • CAD 237
    Fri
  • CAD 247
    Sat
  • CAD 232
    Sun

Flight FAQs

  • Which airlines offer the cheapest flights from Manila to El Nido?

    Based on Trip.com data, Cebu Pacific offers Cheapest nonstop one-way flights from CAD 167 (for example, MNL–ENI on Mon, Oct 5). For a Cheapest nonstop return flight, Cebu Pacific offers fares from CAD 317, departing on Fri, Nov 6 and returning on Wed, Nov 11.
  • At the moment, you can catch a direct flight from Manila to El Nido with the following airlines, including: Cebu Pacific Selected airlines are based on historical data collected from flight bookings users made on Trip.com within the last 90 days.
  • By analyzing data from all airlines on the Trip.com flight calendar, it looks like the best time to book a flight from Manila to El Nido is around 40 days (6 weeks) in advance, and the best time to fly is usually on Tuesday, Wednesday, and Saturday. Tuesday typically offers the cheapest flights for departure, while Saturday offers the best return deals.
  • On average, 8 direct flights operate each week between Manila and El Nido. See below the schedules of the main airlines serving this route:
    AirSWIFT AirLine: -/-/-/-/-/-/- – T65176 (departure at 10:23) AirSWIFT AirLine: -/-/-/-/-/-/- – T65174 (departure at 13:52) AirSWIFT AirLine: -/-/-/-/-/-/- – T65172 (departure at 20:40)
  • Here are some tips for finding the best flight deals from Manila to El Nido on Trip.com:
    · Be flexible with your travel dates. The cheapest flight is currently on Mon, Oct 5, with one-way fares from just CAD 167.
    · Compare airlines. Cebu Pacific currently offers the lowest fares on this route.
    · Set up a price alert to track fare changes without searching every day.
    · Check Trip.com regularly for flight deals and available promo codes.
    · Avoid peak season or book early. July is generally the busiest month for travel to El Nido.
    · Get exclusive promo codes on the Trip.com app.
  • The cheapest month to book a flight from Manila to El Nido is usually November, when demand is lower.
  • After crunching the numbers on our September flight calendar, it's currently cheapest to fly from Manila to El Nido on September 16, 2026 with Cebu Pacific, with prices starting at CAD 98.
  • Flights to El Nido can arrive at: El Nido Airport (ENI). The most common route connects Ninoy Aquino International Airport and El Nido Airport (MNL–ENI).
  • The time difference between El Nido and Manila is 0m.
  • Tickets can only be changed or cancelled if permitted by airline policy. To submit a change or cancellation request, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and segment, and submit a request. Please note that additional charges may apply according to the airline ticket policy. However, if the flight has been rescheduled and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For more details about change and cancellation policies, please check the customer support pages.
  • Based on Trip.com data for flights departing in the next 30 days, the average one-way fare from Manila to El Nido is CAD 231. Fares vary by travel date, airline and availability.
  • Enter Manila and El Nido, choose your travel dates and passengers, then compare flights by price, duration and baggage. Select a fare, review the change and cancellation rules, enter traveler details and complete payment to receive your confirmation.
  • Cebu Pacific, Cebgo and Philippines AirAsiaare the most popular budget airlines flying from Manila to El Nido. Check baggage, seat and payment fees before comparing the final price.

Trip.com airline insights on flights from Manila to El Nido

Which airlines offer the cheapest direct flights from Manila to El Nido?

Data is based on the past 12 months and reflects the average fare of all direct flights from Manila to El Nido on Trip.com.

Based on Trip.com data from the past 12 months, the airline offering the cheapest direct flights from Manila to El Nido is AirSWIFT AirLine, with an average fare of CAD 247.

CAD 208
CAD 247
CAD 287
CAD 327
CAD 366
AirSWIFT AirLine
CAD 247
AirSWIFT AirLine
Cebu Pacific
CAD 356
Cebu Pacific
Cebgo
CAD 366
Cebgo

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Note: Prices shown on this page are estimated lowest price and include all taxes and fees found in the last 24 hours.

Book with no extra fees

Prices displayed on this page are all-inclusive prices (incl. taxes, fuel surcharge, civil aviation development fund, etc) with all fees confirmed before payment. Fees for luggage, meals, Wi-Fi, or other additional services are also included as shown in the flight cards.

Real-time pricing updates

Prices, availability, and travel information on this page were updated within the last 24 hours—even in real-time. The more popular the route, the more precise the data.

Change & Cancellation Policy

Trip.com displays flight cancellation and change policies for each flight ticket during the booking process, including fees and applicable conditions. Please check the following scenarios:
Voluntary cancellation/change:
To submit a change or cancellation request, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and segment, and submit a request. Please note that additional charges may apply according to the airline ticket policy.
Cancellation/change due to a flight schedule change:
If the flight has been rescheduled and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For more details about change and cancellation policies, please check the customer support pages.